Detailed information of matrix profile MA1367.1

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Profile summary
Name: AT1G76870
Matrix ID: MA1367.1
Class: Helix-Turn-Helix
Family: Trihelix
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 22236699
Uniprot ID:
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 146 155 43 20 4 0 2 36 10 145 123 91 115 100 ]
C [ 35 53 222 257 0 0 0 2 5 3 73 65 59 53 ]
G [ 46 71 150 4 452 450 6 0 5 21 173 127 64 94 ]
T [ 229 177 41 175 0 6 448 418 436 287 87 173 218 209 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1367.1 MA1367 1 AT1G76870 Arabidopsis thaliana
Trihelix Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: