Detailed information of matrix profile MA1330.1

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Profile summary
Name: ATHB24
Matrix ID: MA1330.1
Class: Homeo domain factors
Family: ZF-HD
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 11247607
Uniprot ID:
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 368 357 260 179 217 12 411 585 0 0 598 394 75 167 286 ]
C [ 45 63 76 153 35 13 14 0 0 0 0 7 108 73 53 ]
G [ 29 54 88 76 242 2 175 13 0 0 2 192 142 160 95 ]
T [ 158 126 176 192 106 573 0 2 600 600 0 7 275 200 166 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1330.1 MA1330 1 ATHB24 Arabidopsis thaliana
ZF-HD Homeo domain factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0289.1

ChIP-seq Centrality
log(P-value): -4084.94

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0289.1

ChIP-seq Centrality
log(P-value): -4074.15

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: