Detailed information of matrix profile MA1330.1

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Profile summary
Name: ATHB24
Matrix ID: MA1330.1
Class: Homeo domain factors
Family: ZF-HD
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 11247607
Uniprot ID:
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 166 200 275 7 0 600 600 2 0 573 106 192 176 126 158 ]
C [ 95 160 142 192 2 0 0 13 175 2 242 76 88 54 29 ]
G [ 53 73 108 7 0 0 0 0 14 13 35 153 76 63 45 ]
T [ 286 167 75 394 598 0 0 585 411 12 217 179 260 357 368 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1330.1 MA1330 1 ATHB24 Arabidopsis thaliana
ZF-HD Homeo domain factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0289.1

ChIP-seq Centrality
log(P-value): -4084.94

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0289.1

ChIP-seq Centrality
log(P-value): -4074.15

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: