Detailed information of matrix profile MA1218.1

  1. Home
  2. Matrix > MA1218.1

Profile summary
Name: CBF4
Matrix ID: MA1218.1
Class: AP2/ERF domain
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 9952441
Uniprot ID: Q9FJ93  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 113 103 410 34 0 0 0 0 21 0 200 274 214 ]
C [ 162 130 17 109 0 0 597 0 0 311 95 65 152 ]
G [ 78 190 72 52 597 0 0 597 576 0 245 165 88 ]
T [ 244 174 98 402 0 597 0 0 0 286 57 93 143 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1218.1 MA1218 1 CBF4 Arabidopsis thaliana
AP2/ERF domain
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0316.1

ChIP-seq Centrality
log(P-value): -30622.7

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0316.1

ChIP-seq Centrality
log(P-value): -30391.3

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: