Detailed information of matrix profile MA1218.1

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Profile summary
Name: CBF4
Matrix ID: MA1218.1
Class: AP2/ERF domain
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 9952441
Uniprot ID: Q9FJ93  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 143 93 57 286 0 0 0 597 0 402 98 174 244 ]
C [ 88 165 245 0 576 597 0 0 597 52 72 190 78 ]
G [ 152 65 95 311 0 0 597 0 0 109 17 130 162 ]
T [ 214 274 200 0 21 0 0 0 0 34 410 103 113 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1218.1 MA1218 1 CBF4 Arabidopsis thaliana
AP2/ERF domain
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0316.1

ChIP-seq Centrality
log(P-value): -30622.7

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0316.1

ChIP-seq Centrality
log(P-value): -30391.3

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: