Detailed information of matrix profile MA1179.1

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Profile summary
Name: MYB1
Matrix ID: MA1179.1
Class: Helix-Turn-Helix
Family: Myb
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25215497
Uniprot ID: Q42575  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 48 35 48 95 0 3 0 0 0 97 73 75 44 41 32 19 27 28 60 ]
C [ 10 17 8 1 144 89 0 0 0 0 16 13 11 36 35 38 25 23 3 ]
G [ 47 11 26 32 0 52 144 0 0 8 19 18 45 20 15 65 29 17 39 ]
T [ 39 81 62 16 0 0 0 144 144 39 36 38 44 47 62 22 63 76 42 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1179.1 MA1179 1 MYB1 Arabidopsis thaliana
Myb Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: