Detailed information of matrix profile MA1179.1

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Profile summary
Name: MYB1
Matrix ID: MA1179.1
Class: Helix-Turn-Helix
Family: Myb
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25215497
Uniprot ID: Q42575  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 42 76 63 22 62 47 44 38 36 39 144 144 0 0 0 16 62 81 39 ]
C [ 39 17 29 65 15 20 45 18 19 8 0 0 144 52 0 32 26 11 47 ]
G [ 3 23 25 38 35 36 11 13 16 0 0 0 0 89 144 1 8 17 10 ]
T [ 60 28 27 19 32 41 44 75 73 97 0 0 0 3 0 95 48 35 48 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1179.1 MA1179 1 MYB1 Arabidopsis thaliana
Myb Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: