Detailed information of matrix profile MA1178.1

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Profile summary
Name: MYB3R1
Matrix ID: MA1178.1
Class: Helix-Turn-Helix
Family: Myb
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25215497
Uniprot ID: Q9S7G7  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 274 290 327 191 232 45 220 422 48 0 0 0 0 317 164 ]
C [ 83 51 33 63 86 72 2 2 552 600 0 0 0 1 132 ]
G [ 91 87 22 52 123 51 228 126 0 0 600 0 0 235 192 ]
T [ 152 172 218 294 159 432 150 50 0 0 0 600 600 47 112 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1178.1 MA1178 1 MYB3R1 Arabidopsis thaliana
Myb Helix-Turn-Helix
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0362.1

ChIP-seq Centrality
log(P-value): -17444.4

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0362.1

ChIP-seq Centrality
log(P-value): -17408.6

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: