Detailed information of matrix profile MA1178.1

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Profile summary
Name: MYB3R1
Matrix ID: MA1178.1
Class: Helix-Turn-Helix
Family: Myb
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25215497
Uniprot ID: Q9S7G7  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 112 47 600 600 0 0 0 50 150 432 159 294 218 172 152 ]
C [ 192 235 0 0 600 0 0 126 228 51 123 52 22 87 91 ]
G [ 132 1 0 0 0 600 552 2 2 72 86 63 33 51 83 ]
T [ 164 317 0 0 0 0 48 422 220 45 232 191 327 290 274 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1178.1 MA1178 1 MYB3R1 Arabidopsis thaliana
Myb Helix-Turn-Helix
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0362.1

ChIP-seq Centrality
log(P-value): -17444.4

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0362.1

ChIP-seq Centrality
log(P-value): -17408.6

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: