Detailed information of matrix profile MA0925.1

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Profile summary
Name: sma-4
Matrix ID: MA0925.1
Class: SMAD/NF-1 DNA-binding domain factors
Family: SMAD factors
Collection: CORE
Taxon: Nematodes
Species: Caenorhabditis elegans
Data Type: PBM
Validation: 16322555
Uniprot ID: P45897  
Source:
Comment: Data is from Weirauch PBM (2014)

Sequence logo

Frequency matrix

         
A [ 331 273 33 0 83 0 0 215 27 360 217 ]
C [ 223 228 33 0 0 1000 0 0 27 242 349 ]
G [ 223 300 33 917 0 0 0 785 836 256 217 ]
T [ 223 199 901 83 917 0 1000 0 110 142 217 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0925.1 MA0925 1 sma-4 Caenorhabditis elegans
SMAD factors SMAD/NF-1 DNA-binding domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

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GC Content: