Detailed information of matrix profile MA0110.1

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Profile summary
Name: ATHB-5
Matrix ID: MA0110.1
Class: Homeo domain factors
Family: Homeo
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: SELEX
Validation: 11247607
Uniprot ID: 11762265  
Source:
Comment: updated matrix since last release

Sequence logo

Frequency matrix

         
A [ 37 37 0 20 37 0 1 3 6 ]
C [ 0 0 0 10 0 0 0 4 9 ]
G [ 0 0 0 5 0 0 6 29 19 ]
T [ 0 0 37 2 0 37 30 1 3 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0110.1 MA0110 1 ATHB-5 Arabidopsis thaliana
Homeo Homeo domain factors
MA0110.2 MA0110 2 ATHB-5 Arabidopsis thaliana
Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

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