Detailed information of matrix profile MA0086.2

  1. Home
  2. Matrix > MA0086.2

Profile summary
Name: sna
Matrix ID: MA0086.2
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc finger factors
Collection: CORE
Taxon: Insects
Species: Drosophila melanogaster
Data Type: SMiLE-seq
Validation: 8371971
Uniprot ID: P08044  
Source: 28092692
Comment:

Sequence logo

Frequency matrix

         
A [ 241 128 454 835 5 984 87 5 5 10 42 535 290 ]
C [ 200 324 57 7 984 4 4 4 4 5 455 139 244 ]
G [ 309 264 387 114 6 7 903 986 7 976 184 147 230 ]
T [ 250 284 102 44 5 5 6 5 984 10 319 179 236 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0086.1 MA0086 1 sna Drosophila melanogaster
More than 3 adjacent zinc finger factors C2H2 zinc finger factors
MA0086.2 MA0086 2 sna Drosophila melanogaster
More than 3 adjacent zinc finger factors C2H2 zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: