Detailed information of matrix profile MA0072.1

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Profile summary
Name: RORA(var.2)
Matrix ID: MA0072.1
Class: Nuclear receptors with C4 zinc fingers
Family: Thyroid hormone receptor-related factors (NR1)
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: SELEX
Validation: 7926749
Uniprot ID: P35398  
Source:
Comment: isoform type

Sequence logo

Frequency matrix

         
A [ 9 17 15 35 23 2 0 28 0 0 0 0 36 15 ]
C [ 8 2 0 1 0 12 0 0 0 0 0 36 0 6 ]
G [ 8 7 3 0 0 13 0 8 36 36 0 0 0 10 ]
T [ 11 10 18 0 13 9 36 0 0 0 36 0 0 5 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0072.1 MA0072 1 RORA(var.2) Homo sapiens
Thyroid hormone receptor-related factors (NR1) Nuclear receptors with C4 zinc fingers
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description: RAR-related orphan receptor A

Alias: RZRA,ROR1,ROR2,ROR3,NR1F1

Symbol: RORA

Consensus:

Included Models:

GC Content: