Detailed information of matrix profile MA0062.2

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Profile summary
Name: Gabpa
Matrix ID: MA0062.2
Class: Tryptophan cluster factors
Family: Ets-related factors
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: ChIP-seq
Validation: 19160518
Uniprot ID: Q91YY8  
Source:
Comment: -

Sequence logo

Frequency matrix

         
A [ 32 70 0 0 991 989 94 56 154 264 233 ]
C [ 768 914 0 0 1 2 32 261 137 262 357 ]
G [ 188 4 990 991 1 0 866 37 603 415 224 ]
T [ 1 1 1 0 0 2 0 637 96 49 176 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0062.1 MA0062 1 GABPA Homo sapiens
Ets-related factors Tryptophan cluster factors
MA0062.2 MA0062 2 Gabpa Mus musculus
Ets-related factors Tryptophan cluster factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0039.1

ChIP-seq Centrality
log(P-value): -4151.57

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0039.1

ChIP-seq Centrality
log(P-value): -4116.48

TFFM detailed summary logos

Description: GA binding protein transcription factor,alpha subunit 60kDa

Alias: E4TF1A,NFT2,NRF2,E4TF1-60,NRF2A

Symbol: GABPA

Consensus:

Included Models:

GC Content: