Detailed information of matrix profile MA0012.1

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Profile summary
Name: br(var.3)
Matrix ID: MA0012.1
Class: C2H2 zinc finger factors
Family: Other factors with up to three adjacent zinc fingers
Collection: CORE
Taxon: Insects
Species: Drosophila melanogaster
Data Type: COMPILED
Validation: 8062827
Uniprot ID: Q01295  
Source:
Comment: Different splice forms affect DNA binding: four matrices

Sequence logo

Frequency matrix

         
A [ 3 9 10 12 0 4 10 6 6 4 2 ]
C [ 1 2 0 0 10 0 0 0 1 3 3 ]
G [ 1 1 0 0 1 0 0 4 2 2 5 ]
T [ 7 0 2 0 1 8 2 2 3 3 2 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0012.1 MA0012 1 br(var.3) Drosophila melanogaster
Other factors with up to three adjacent zinc fingers C2H2 zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

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