Search profile(s)

  1. Home
  2. Search

184 profile(s) found

Display profiles
ID Name Species Class Family Logo
MA1102.1 CTCFL Homo sapiens
 C2H2 zinc finger factors More than 3 adjacent zinc finger factors
MA1103.1 FOXK2 Homo sapiens
 Fork head / winged helix factors Forkhead box (FOX) factors
MA1104.1 GATA6 Homo sapiens
 Other C4 zinc finger-type factors GATA-type zinc fingers
MA1105.1 GRHL2 Homo sapiens
 Grainyhead domain factors Grainyhead-related factors
MA1106.1 HIF1A Homo sapiens
 Basic helix-loop-helix factors (bHLH) PAS domain factors
MA1107.1 KLF9 Homo sapiens
 C2H2 zinc finger factors Three-zinc finger Kruppel-related factors
MA1108.1 MXI1 Homo sapiens
 Basic helix-loop-helix factors (bHLH) bHLH-ZIP factors
MA1109.1 NEUROD1 Homo sapiens
 Basic helix-loop-helix factors (bHLH) Tal-related factors
MA1110.1 NR1H4 Homo sapiens
 Nuclear receptors with C4 zinc fingers Thyroid hormone receptor-related factors (NR1)
MA1111.1 NR2F2 Homo sapiens
 Nuclear receptors with C4 zinc fingers RXR-related receptors (NR2)
Showing 10 profiles of page 17 from 19 pages

Analyze selected profiles

Please select matrix profiles on the left side to add to your cart or perform the following analysis.

Add to cart

You have 0 profile(s) in your cart. You can add profiles to the cart to download or perform analysis.
View cart

Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.