Detailed information of matrix profile PL0012.1

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Profile summary
Name: hlh-2::hlh-8
Matrix ID: PL0012.1
Class: Zipper-type
Family: Helix-Loop-Helix
Collection: PBM_HLH
Taxon: Nematodes
Species: Caenorhabditis elegans
Data Type: PBM
Validation: 19632181
Uniprot ID: Q11094   Q17588  
Source:
Comment: heterodimer

Sequence logo

Frequency matrix

         
A [ 18 41 28 56 18 2 95 0 87 1 1 1 8 13 32 22 ]
C [ 13 25 23 8 77 95 0 6 5 1 0 4 11 17 22 22 ]
G [ 39 18 19 21 2 1 1 57 6 1 95 16 16 28 30 21 ]
T [ 28 14 28 13 1 0 1 35 0 96 2 77 63 39 14 33 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PL0012.1 PL0012 1 hlh-2::hlh-8 Caenorhabditis elegans
Helix-Loop-Helix Zipper-type
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: