Detailed information of matrix profile PL0004.1

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Profile summary
Name: hlh-27
Matrix ID: PL0004.1
Class: Zipper-type
Family: Helix-Loop-Helix
Collection: PBM_HLH
Taxon: Nematodes
Species: Caenorhabditis elegans
Data Type: PBM
Validation: 19632181
Uniprot ID: Q18056  
Source:
Comment: homodimer

Sequence logo

Frequency matrix

         
A [ 43 13 33 1 23 0 16 0 0 0 0 0 7 39 26 ]
C [ 14 17 9 94 5 91 0 0 0 0 94 86 61 19 17 ]
G [ 25 30 51 1 65 0 83 0 98 5 0 1 12 14 28 ]
T [ 16 38 4 1 5 7 0 98 0 93 4 10 19 26 27 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PL0004.1 PL0004 1 hlh-27 Caenorhabditis elegans
Helix-Loop-Helix Zipper-type
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: