Detailed information of matrix profile PH0170.1

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Profile summary
Name: Tgif2
Matrix ID: PH0170.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: Q8C0Y1  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 12 10 44 13 1 0 97 0 98 1 8 3 37 24 17 23 ]
C [ 22 15 9 4 0 0 0 99 0 0 69 5 22 25 14 11 ]
G [ 44 29 9 6 0 99 0 0 2 97 16 1 30 33 8 14 ]
T [ 22 46 38 78 99 0 2 1 0 2 7 91 11 19 61 52 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0170.1 PH0170 1 Tgif2 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: