Detailed information of matrix profile PH0159.1

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Profile summary
Name: Rhox6
Matrix ID: PH0159.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: Q8BPD6  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 30 27 10 27 59 8 3 86 93 0 7 93 52 15 19 8 54 ]
C [ 14 24 39 42 12 36 3 5 3 3 1 1 4 18 15 40 5 ]
G [ 34 24 40 23 22 4 1 1 3 3 5 3 36 39 43 21 5 ]
T [ 21 25 10 8 7 52 93 7 0 93 86 3 8 28 24 31 36 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0159.1 PH0159 1 Rhox6 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: