Detailed information of matrix profile PH0140.1

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Profile summary
Name: Pknox1
Matrix ID: PH0140.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: O70477  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 15 11 49 21 0 1 97 0 97 0 4 2 14 18 14 31 ]
C [ 17 19 7 4 0 0 0 99 0 1 34 4 52 21 36 17 ]
G [ 47 42 11 8 0 99 1 0 3 97 58 1 29 28 6 9 ]
T [ 20 29 33 68 99 0 2 1 0 2 4 92 5 32 43 44 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0140.1 PH0140 1 Pknox1 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

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GC Content: