Detailed information of matrix profile PH0132.1

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Profile summary
Name: Pax6
Matrix ID: PH0132.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: P63015  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 19 22 16 56 62 16 12 94 96 2 1 80 47 7 18 68 ]
C [ 17 20 31 28 21 28 7 2 1 0 2 1 4 10 43 11 ]
G [ 41 19 28 8 10 5 1 2 0 1 2 7 40 21 13 15 ]
T [ 23 39 26 7 7 52 80 1 2 96 94 12 8 62 26 6 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0132.1 PH0132 1 Pax6 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: