Detailed information of matrix profile PH0126.1

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Profile summary
Name: Obox6
Matrix ID: PH0126.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: Q8VHG3  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 19 35 46 3 98 99 0 1 0 6 19 19 13 29 14 ]
C [ 46 5 8 0 0 0 0 98 96 19 35 4 14 20 11 ]
G [ 23 34 2 0 1 0 3 0 0 61 12 9 4 21 24 ]
T [ 12 25 44 97 1 0 97 0 4 14 35 68 69 30 51 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0126.1 PH0126 1 Obox6 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: