Detailed information of matrix profile PH0123.1

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Profile summary
Name: Obox3
Matrix ID: PH0123.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: Q8VHG6  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 27 13 34 15 26 11 8 1 98 0 1 95 72 14 28 43 26 ]
C [ 17 27 21 16 3 4 0 0 1 0 1 0 2 67 6 29 27 ]
G [ 15 35 33 58 63 77 91 97 0 1 0 1 13 9 16 11 7 ]
T [ 41 25 11 10 8 8 1 2 1 99 98 3 14 10 50 17 40 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0123.1 PH0123 1 Obox3 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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Consensus:

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GC Content: