Detailed information of matrix profile PH0114.1

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Profile summary
Name: Nkx2-5
Matrix ID: PH0114.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: P42582  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 55 64 42 4 7 2 92 99 0 4 4 0 30 11 16 30 ]
C [ 9 3 9 17 5 49 0 0 0 0 0 12 37 22 33 14 ]
G [ 27 21 13 16 1 9 7 0 97 1 96 86 14 3 11 28 ]
T [ 9 13 36 63 87 39 1 0 2 95 0 2 18 64 40 28 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0114.1 PH0114 1 Nkx2-5 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: