Detailed information of matrix profile PH0112.1

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Profile summary
Name: Nkx2-3
Matrix ID: PH0112.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: P97334  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 20 39 11 9 80 88 1 0 75 1 2 3 59 68 40 38 ]
C [ 40 19 23 20 0 1 2 25 0 96 9 17 10 9 14 7 ]
G [ 17 21 8 17 17 9 96 0 25 2 1 0 15 14 37 43 ]
T [ 23 21 58 53 3 2 1 75 0 1 88 80 16 8 10 11 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0112.1 PH0112 1 Nkx2-3 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: