Detailed information of matrix profile PH0110.1

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Profile summary
Name: Nkx1-2
Matrix ID: PH0110.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: P42580  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 36 14 23 56 11 2 93 96 4 0 68 35 6 13 28 43 29 ]
C [ 2 20 34 18 47 30 6 0 0 0 0 7 40 18 35 23 30 ]
G [ 5 57 15 15 7 0 0 0 0 6 30 47 7 50 25 16 16 ]
T [ 56 10 28 11 35 68 0 4 96 93 2 11 48 20 12 19 26 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0110.1 PH0110 1 Nkx1-2 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: