Detailed information of matrix profile PH0106.1

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Profile summary
Name: Msx1
Matrix ID: PH0106.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: P13297  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 20 33 62 18 1 99 99 0 0 75 31 12 33 17 17 32 ]
C [ 13 18 18 21 17 0 0 0 0 0 13 16 11 11 39 27 ]
G [ 36 23 11 17 0 0 0 0 2 24 43 6 20 43 19 24 ]
T [ 31 26 10 44 82 1 1 99 98 1 14 66 36 29 25 18 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0106.1 PH0106 1 Msx1 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: