Detailed information of matrix profile PH0102.1

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Profile summary
Name: Meis1
Matrix ID: PH0102.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: Q60954  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 43 51 23 9 95 3 2 0 1 3 0 99 70 36 45 20 ]
C [ 11 6 28 29 1 44 96 2 0 0 99 0 2 9 20 39 ]
G [ 13 21 28 36 3 51 1 0 99 0 0 0 1 9 18 17 ]
T [ 32 22 22 26 2 3 0 98 0 97 0 0 27 46 16 23 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0102.1 PH0102 1 Meis1 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: