Detailed information of matrix profile PH0101.1

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Profile summary
Name: Lmx1b
Matrix ID: PH0101.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: O88609  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 34 25 32 37 36 2 2 97 98 2 2 96 80 24 28 25 14 ]
C [ 22 13 9 5 9 16 2 1 0 1 0 0 2 12 10 26 25 ]
G [ 31 39 15 9 6 2 0 0 1 0 1 2 16 12 19 14 35 ]
T [ 14 23 44 49 49 80 96 2 2 98 97 2 2 53 43 36 26 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0101.1 PH0101 1 Lmx1b Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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Consensus:

Included Models:

GC Content: