Detailed information of matrix profile PH0095.1

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Profile summary
Name: Lhx5
Matrix ID: PH0095.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: P61375  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 42 23 21 53 26 3 1 98 98 1 0 92 85 12 20 23 16 ]
C [ 21 15 16 6 7 10 7 1 0 0 1 0 2 20 14 31 30 ]
G [ 29 32 24 12 14 2 0 1 0 0 1 7 10 6 20 20 35 ]
T [ 9 31 40 30 53 85 92 0 1 98 98 1 3 62 47 25 19 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0095.1 PH0095 1 Lhx5 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: