Detailed information of matrix profile PH0079.1

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Profile summary
Name: Hoxd3
Matrix ID: PH0079.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: P09027  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 48 21 24 11 1 87 98 1 0 84 33 24 21 16 65 39 ]
C [ 21 31 9 14 14 12 1 0 0 0 29 44 33 60 8 5 ]
G [ 22 37 44 37 0 0 0 1 12 14 24 9 10 10 8 37 ]
T [ 9 12 24 37 84 0 1 98 87 1 14 24 37 14 19 19 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0079.1 PH0079 1 Hoxd3 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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Consensus:

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GC Content: