Detailed information of matrix profile PH0078.1

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Profile summary
Name: Hoxd13
Matrix ID: PH0078.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: P70217  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 32 22 40 39 4 1 3 9 98 3 20 33 33 29 34 21 ]
C [ 18 19 11 7 2 0 0 1 0 3 0 0 8 17 19 19 ]
G [ 25 34 30 29 4 0 0 0 1 0 12 65 54 20 18 32 ]
T [ 25 25 19 25 90 98 97 90 0 94 68 2 5 33 30 28 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0078.1 PH0078 1 Hoxd13 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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Consensus:

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GC Content: