Detailed information of matrix profile PH0076.1

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Profile summary
Name: Hoxd11
Matrix ID: PH0076.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: P23813  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 47 28 27 41 19 1 1 16 99 0 1 97 0 16 18 26 43 ]
C [ 20 17 15 12 2 0 0 0 0 82 0 0 86 33 23 12 7 ]
G [ 16 30 35 19 16 1 0 0 0 0 98 2 6 19 15 24 30 ]
T [ 18 25 23 28 63 98 98 84 0 17 1 0 8 32 43 38 20 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0076.1 PH0076 1 Hoxd11 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: