Detailed information of matrix profile PH0074.1

  1. Home
  2. Matrix > PH0074.1

Profile summary
Name: Hoxd1
Matrix ID: PH0074.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: Q01822  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 30 32 24 66 28 4 1 92 99 1 0 85 30 5 24 10 46 ]
C [ 18 27 32 19 10 45 14 7 0 0 1 0 21 40 13 28 11 ]
G [ 20 17 22 8 58 21 0 1 0 0 7 14 45 15 23 16 5 ]
T [ 32 23 22 7 4 30 85 0 1 99 92 1 4 40 41 46 39 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0074.1 PH0074 1 Hoxd1 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: