Detailed information of matrix profile PH0071.1

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Profile summary
Name: Hoxc6
Matrix ID: PH0071.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: P10629  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 14 46 48 43 10 3 91 96 2 6 88 46 12 38 46 32 32 ]
C [ 45 11 17 22 4 9 2 1 1 1 1 40 22 9 16 27 18 ]
G [ 16 31 13 28 40 1 1 1 1 2 9 4 24 16 23 21 23 ]
T [ 25 12 23 7 46 88 6 2 96 91 3 10 42 36 15 20 27 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0071.1 PH0071 1 Hoxc6 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: