Detailed information of matrix profile PH0070.1

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Profile summary
Name: Hoxc5
Matrix ID: PH0070.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: P32043  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 34 29 8 35 58 8 2 94 97 2 1 88 55 8 11 15 9 ]
C [ 20 19 10 13 10 24 10 5 0 1 0 0 13 32 9 46 17 ]
G [ 22 29 15 17 22 13 0 0 1 0 5 10 24 9 34 21 62 ]
T [ 25 23 68 34 10 55 88 1 2 97 94 2 8 51 46 18 13 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0070.1 PH0070 1 Hoxc5 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: