Detailed information of matrix profile PH0066.1

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Profile summary
Name: Hoxc11
Matrix ID: PH0066.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: P31312  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 33 22 32 22 1 2 14 99 0 1 97 0 21 22 16 38 ]
C [ 35 26 19 11 0 0 0 0 76 0 0 88 27 13 20 14 ]
G [ 12 17 27 13 0 0 0 0 0 98 3 4 14 13 12 25 ]
T [ 20 35 22 54 99 98 86 0 23 1 0 8 38 52 53 23 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0066.1 PH0066 1 Hoxc11 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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Consensus:

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GC Content: