Detailed information of matrix profile PH0064.1

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Profile summary
Name: Hoxb9
Matrix ID: PH0064.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: P20615  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 21 18 43 39 9 2 4 27 98 0 3 31 12 4 7 7 ]
C [ 36 15 10 8 3 0 0 0 0 5 1 1 65 31 41 37 ]
G [ 18 45 27 20 1 0 0 0 1 0 54 66 13 7 16 19 ]
T [ 25 23 20 34 87 97 96 73 1 94 42 2 10 58 36 37 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0064.1 PH0064 1 Hoxb9 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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Consensus:

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GC Content: