Detailed information of matrix profile PH0060.1

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Profile summary
Name: Hoxb5
Matrix ID: PH0060.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: P09079  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 52 27 17 12 1 90 98 1 0 92 19 10 28 28 68 22 ]
C [ 23 35 9 15 7 9 1 0 0 0 29 65 25 44 5 16 ]
G [ 14 19 65 38 0 0 0 1 9 7 41 9 10 11 14 14 ]
T [ 11 19 10 35 92 0 1 98 90 1 11 17 36 17 14 48 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0060.1 PH0060 1 Hoxb5 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: