Detailed information of matrix profile PH0050.1

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Profile summary
Name: Hoxa3
Matrix ID: PH0050.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: P02831  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 18 16 19 39 30 7 0 90 99 0 0 97 35 5 ]
C [ 11 29 19 30 10 30 11 10 1 0 0 0 16 35 ]
G [ 21 19 50 15 53 34 0 0 0 0 5 2 46 12 ]
T [ 50 35 12 16 7 28 88 0 0 99 94 1 3 47 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0050.1 PH0050 1 Hoxa3 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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GC Content: