Detailed information of matrix profile PH0048.1

  1. Home
  2. Matrix > PH0048.1

Profile summary
Name: Hoxa13
Matrix ID: PH0048.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: Q62424  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 41 36 48 21 1 3 7 99 0 5 97 0 26 25 29 31 ]
C [ 22 23 9 5 0 0 0 0 80 0 0 5 30 18 20 16 ]
G [ 13 23 13 12 1 0 0 1 0 94 3 93 30 20 19 17 ]
T [ 23 18 30 62 98 97 93 0 20 1 0 2 15 37 32 35 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0048.1 PH0048 1 Hoxa13 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: