Detailed information of matrix profile PH0046.1

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Profile summary
Name: Hoxa10
Matrix ID: PH0046.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: P31310  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 30 24 44 53 20 9 8 28 97 3 1 61 4 22 16 37 ]
C [ 10 9 30 7 5 1 1 1 0 8 0 1 70 45 13 29 ]
G [ 8 39 8 16 6 2 0 1 1 1 27 32 8 21 29 8 ]
T [ 52 28 18 24 69 88 91 70 3 89 71 7 17 12 42 25 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0046.1 PH0046 1 Hoxa10 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: