Detailed information of matrix profile PH0045.1

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Profile summary
Name: Hoxa1
Matrix ID: PH0045.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: P09022  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 46 31 27 7 0 99 99 0 0 97 17 5 13 14 65 21 ]
C [ 18 41 14 17 4 1 0 0 1 0 22 61 15 47 6 19 ]
G [ 30 17 45 48 0 0 0 0 3 3 53 8 10 13 15 42 ]
T [ 6 11 14 28 96 0 1 99 96 1 8 27 62 27 14 19 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0045.1 PH0045 1 Hoxa1 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: