Detailed information of matrix profile PH0044.1

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Profile summary
Name: Homez
Matrix ID: PH0044.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: Q80W88  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 26 28 23 46 61 79 91 76 1 1 97 9 7 38 30 34 18 ]
C [ 31 29 5 18 12 2 3 2 97 0 1 0 17 3 9 14 17 ]
G [ 17 5 19 23 14 3 2 1 1 95 1 3 42 13 11 17 6 ]
T [ 27 37 52 13 14 16 4 21 1 4 1 87 34 46 50 34 59 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0044.1 PH0044 1 Homez Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: