Detailed information of matrix profile PH0039.1

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Profile summary
Name: Mnx1
Matrix ID: PH0039.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: Q9QZW9  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 12 14 56 11 1 97 98 1 0 91 8 2 17 23 25 29 ]
C [ 24 21 25 39 8 2 0 1 0 0 16 17 9 27 35 30 ]
G [ 37 30 17 38 0 0 1 0 2 8 68 25 59 33 11 34 ]
T [ 27 35 2 12 91 0 1 98 97 1 8 56 15 17 29 7 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0039.1 PH0039 1 Mnx1 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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Consensus:

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GC Content: