Detailed information of matrix profile PH0010.1

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Profile summary
Name: Alx1_1
Matrix ID: PH0010.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: Q8C8B0  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 19 7 38 43 5 1 98 98 1 0 92 53 15 23 39 24 15 ]
C [ 44 21 33 9 40 7 0 0 1 1 0 2 21 32 31 29 40 ]
G [ 17 65 14 31 2 0 1 1 0 0 7 40 11 16 12 23 14 ]
T [ 20 7 15 17 53 92 0 1 98 98 1 5 53 29 17 24 31 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0010.1 PH0010 1 Alx1_1 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: