Detailed information of matrix profile PB0186.1

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Profile summary
Name: Tcf3_2
Matrix ID: PB0186.1
Class: Other Alpha-Helix
Family: High Mobility Group box (HMG)
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: Q9Z1J1  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 33 34 12 20 12 31 21 28 13 20 21 6 14 18 20 ]
C [ 19 14 18 15 15 12 11 10 21 19 39 35 36 39 28 ]
G [ 22 17 17 17 20 18 14 18 13 11 21 48 37 24 18 ]
T [ 26 35 53 49 53 40 54 43 53 50 19 11 13 19 34 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0186.1 PB0186 1 Tcf3_2 Mus musculus
High Mobility Group box (HMG) Other Alpha-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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Consensus:

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GC Content: