Detailed information of matrix profile PB0180.1

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Profile summary
Name: Sp4_2
Matrix ID: PB0180.1
Class: Zinc-coordinating
Family: BetaBetaAlpha-zinc finger
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: Q62445  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 26 25 31 12 25 4 82 4 5 3 2 1 36 25 30 ]
C [ 36 20 12 3 43 79 15 93 5 95 95 21 8 16 24 ]
G [ 12 26 41 81 18 3 2 2 83 2 3 2 6 9 31 ]
T [ 25 29 16 4 14 13 1 1 6 1 1 76 50 49 15 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0180.1 PB0180 1 Sp4_2 Mus musculus
BetaBetaAlpha-zinc finger Zinc-coordinating
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: