Detailed information of matrix profile PB0179.1

  1. Home
  2. Matrix > PB0179.1

Profile summary
Name: Sp100_2
Matrix ID: PB0179.1
Class: Other Alpha-Helix
Family: Sand
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: O35892  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 12 14 12 5 17 3 3 22 12 16 66 61 42 33 16 ]
C [ 30 36 68 3 10 94 3 36 22 12 6 11 14 21 26 ]
G [ 18 31 7 90 7 2 91 20 27 19 4 11 9 22 32 ]
T [ 40 19 13 2 65 1 3 22 39 53 24 18 35 24 26 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0179.1 PB0179 1 Sp100_2 Mus musculus
Sand Other Alpha-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: